6J6D

Borrelia burgdorferi OspA via surface entropy reduction (form4)

PDB DOI: https://doi.org/10.2210/pdb6J6D/pdb

Classification: LIPID BINDING PROTEIN
Organism(s): Borreliella burgdorferi B31
Expression System: Escherichia coli BL21(DE3)
Mutation(s): Yes

Deposited: 2019-01-14 Released: 2019-11-27
Deposition Author(s): Fujiwara, H., Makabe, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.90 Å
R-Value Free: 0.244
R-Value Work: 0.201
R-Value Observed: 0.203

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals

Fujiwara, H., Hongo, K., Hori, Y., Yoshida, N., Makabe, K.

(2019) J Mol Liq 290

DOI: https://doi.org/10.1016/j.molliq.2019.111161

Macromolecule Content

Total Structure Weight: 26.4 kDa
Atom Count: 1,965
Modelled Residue Count: 246
Deposited Residue Count: 251
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Outer surface protein A	A [auth O]	251	Borreliella burgdorferi B31	Mutation(s): 13 Gene Names: ospA, BB_A15
UniProt
Find proteins for P0CL66 (Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)) Explore P0CL66 Go to UniProtKB: P0CL66
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P0CL66
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.90 Å
R-Value Free: 0.244
R-Value Work: 0.201
R-Value Observed: 0.203
Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 33.193	α = 90
b = 54.341	β = 100.82
c = 65.359	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
Coot	model building

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2019-11-27

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2019-11-27
Type: Initial release
Version 1.1: 2023-11-22
Changes: Data collection, Database references, Refinement description

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.