Metal- and Serine-Dependent Meta-Cleavage Product Hydrolases Utilize Similar Nucleophile-Activation Strategies
Kuatsjah, E., Chan, A.C.K., Hurst, T.E., Snieckus, V., Murphy, M.E.P., Eltis, L.D.(2018) ACS Catal 8: 11622-11632
Experimental Data Snapshot
Starting Model: experimental
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(2018) ACS Catal 8: 11622-11632
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
2,2',3-trihydroxy-3'-methoxy-5,5'-dicarboxybiphenyl meta-cleavage compound hydrolase | 332 | Sphingobium sp. SYK-6 | Mutation(s): 0  Gene Names: ligY, SLG_07750 | ||
UniProt | |||||
Find proteins for G2IN02 (Sphingobium sp. (strain NBRC 103272 / SYK-6)) Explore G2IN02  Go to UniProtKB:  G2IN02 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | G2IN02 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
HVS (Subject of Investigation/LOI) Query on HVS | AA [auth I] K [auth A] M [auth B] O [auth C] Q [auth D] | (1Z,3E)-5-carboxy-3-methyl-5-oxo-1-phenylpenta-1,3-dien-1-olate C13 H11 O4 JCSKQBIZFFCCKU-UVTPKQPNSA-M | |||
ZN Query on ZN | J [auth A] L [auth B] N [auth C] P [auth D] R [auth E] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 180.645 | α = 90 |
b = 195.099 | β = 90 |
c = 179.917 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XSCALE | data scaling |
PDB_EXTRACT | data extraction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Natural Sciences and Engineering Research Council (NSERC, Canada) | Canada | 04802 |
Natural Sciences and Engineering Research Council (NSERC, Canada) | Canada | 171359 |