Crystal structure of octameric form of Nucleoside diphosphate kinase from Acinetobacter baumannii at 2.2 A resolution
Singh, P.K., Sikarwar, J., Kaur, P., Sharma, S., Singh, T.P.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Nucleoside diphosphate kinase | 143 | Acinetobacter baumannii | Mutation(s): 0  Gene Names:  ndk, A7A59_04275, A7M79_04705, A7M90_00500, A7N09_02655, AB895_2022, AB988_1826, AB994_3665, ABUW_3381, APD06_17770... EC: 2.7.4.6 | ![]() | |
UniProt | |||||
Find proteins for V5VIC4 (Acinetobacter baumannii) Explore V5VIC4  Go to UniProtKB:  V5VIC4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | V5VIC4 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MG Query on MG | I [auth A] J [auth A] K [auth B] L [auth C] M [auth D] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 70.1 | α = 80.51 |
b = 69.93 | β = 69.94 |
c = 71.7 | γ = 89.76 |
Software Name | Purpose |
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REFMAC | refinement |
XDS | data reduction |
SCALEPACK | data scaling |
MOLREP | phasing |