Crystal structure of Ofd2 in complex with 2OG from Schizosaccharomyces pombe
Wang, J., Gao, Y.X., Guo, G.R., Zhu, Z.L., Niu, L.W., Teng, M.K.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Uncharacterized protein P8A3.02c | 184 | Schizosaccharomyces pombe 972h- | Mutation(s): 2  Gene Names: SPAP8A3.02c | ||
UniProt | |||||
Find proteins for Q9UT12 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9UT12  Go to UniProtKB:  Q9UT12 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9UT12 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
AKG Query on AKG | C [auth A] | 2-OXOGLUTARIC ACID C5 H6 O5 KPGXRSRHYNQIFN-UHFFFAOYSA-N | |||
ACT Query on ACT | D [auth A] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
FE Query on FE | B [auth A] | FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 71.114 | α = 90 |
b = 80.312 | β = 90 |
c = 82.607 | γ = 90 |
Software Name | Purpose |
---|---|
HKL-2000 | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
DENZO | data reduction |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Chinese Ministry of Science and Technology | China | 2012CB917200 |
Chinese Ministry of Science and Technology | China | 2011CBA00800 |
Chinese National Natural Science Foundation | China | 31130018 |
Chinese National Natural Science Foundation | China | 31170726 |