High resolution structure of human gliomedin
Liu, H., Lin, Z., Xu, F.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Gliomedin | 251 | Homo sapiens | Mutation(s): 0  Gene Names: GLDN, COLM, UNQ9339/PRO34011 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q6ZMI3 (Homo sapiens) Explore Q6ZMI3  Go to UniProtKB:  Q6ZMI3 | |||||
PHAROS:  Q6ZMI3 GTEx:  ENSG00000186417  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q6ZMI3 | ||||
Glycosylation | |||||
Glycosylation Sites: 3 | Go to GlyGen: Q6ZMI3-1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | F [auth A], G [auth A], H [auth A] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N | |||
PO4 Query on PO4 | I [auth A] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
EDO Query on EDO | J [auth A], K [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
CA Query on CA | L [auth A], M [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
NA Query on NA | B [auth A], C [auth A], D [auth A], E [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 46.88 | α = 90 |
b = 81.573 | β = 90 |
c = 66.194 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-3000 | phasing |