Structural basis for GII.4 norovirus inhibition by human milk oligosaccharides.
Singh, B.K., Hansman, G.S.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
VP1 | 306 | Norovirus Hu/GII.4/CHDC2094/1974/US | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for D0QJ68 (Norovirus Hu/GII.4/CHDC2094/1974/US) Explore D0QJ68  Go to UniProtKB:  D0QJ68 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | D0QJ68 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FLC Query on FLC | G [auth B] | CITRATE ANION C6 H5 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-K | |||
EDO Query on EDO | E [auth A], F [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 90.45 | α = 90 |
b = 107.11 | β = 90 |
c = 136.73 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XSCALE | data scaling |
PHASER | phasing |
PDB_EXTRACT | data extraction |
XDS | data reduction |
PHASER | phasing |