Crystal Structure of PDGFRA in Complex with WQ-C-159
Yan, X.E., Yun, C.H.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Platelet-derived growth factor receptor alpha | 356 | Homo sapiens | Mutation(s): 0  Gene Names: PDGFRA, PDGFR2, RHEPDGFRA EC: 2.7.10.1 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P16234 (Homo sapiens) Explore P16234  Go to UniProtKB:  P16234 | |||||
PHAROS:  P16234 GTEx:  ENSG00000134853  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P16234 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
748 Query on 748 | B [auth A] | N-[2-(dimethylamino)ethyl]-N-[[4-[[4-methyl-3-[(4-pyridin-3-ylpyrimidin-2-yl)amino]phenyl]carbamoyl]phenyl]methyl]pyridine-3-carboxamide C34 H34 N8 O2 NWVOHJOHQOHBMB-UHFFFAOYSA-N | |||
CL Query on CL | C [auth A], D [auth A], E [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 48.776 | α = 90 |
b = 49.372 | β = 90 |
c = 108.696 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
DENZO | data reduction |
HKL-3000 | data scaling |
PHASER | phasing |