Design, synthesis, and the X-ray co-crystal structure of Highly Potent, Selective, and Orally Bioavailable, Novel Peroxisome Proliferator-Activated Receptor delta Agonists
Chin, J.W., Cho, S.J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Peroxisome proliferator-activated receptor delta | 292 | Homo sapiens | Mutation(s): 0  Gene Names: PPARD, NR1C2, PPARB | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q03181 (Homo sapiens) Explore Q03181  Go to UniProtKB:  Q03181 | |||||
PHAROS:  Q03181 GTEx:  ENSG00000112033  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q03181 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
8RR Query on 8RR | C [auth A], H [auth B] | 2-[2-methyl-4-[[4-methyl-2-[4-(trifluoromethyl)phenyl]-1,3-selenazol-5-yl]methylsulfanyl]phenoxy]ethanoic acid C21 H18 F3 N O3 S Se FLCJPWUNOIWRCO-UHFFFAOYSA-N | |||
JZR Query on JZR | G [auth A], J [auth B] | hexyl beta-D-glucopyranoside C12 H24 O6 JVAZJLFFSJARQM-RMPHRYRLSA-N | |||
PGO Query on PGO | F [auth A] | S-1,2-PROPANEDIOL C3 H8 O2 DNIAPMSPPWPWGF-VKHMYHEASA-N | |||
K Query on K | D [auth A] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N | |||
CL Query on CL | E [auth A], I [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 39.766 | α = 90 |
b = 93.896 | β = 97.4 |
c = 96.871 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-2000 | data processing |
PHENIX | phasing |
HKL-2000 | data scaling |