Crystal structure of the capping enzyme P5 from Rice Dwarf Virus
Nakamichi, Y., Higashiura, A., Narita, H., Hagiwara, K., Uehara-Ichiki, T., Omura, T., Nakagawa, A.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
mRNA capping enzyme P5 | 804 | Rice dwarf virus (isolate O) | Mutation(s): 0  EC: 2.7.7.50 | ![]() | |
UniProt | |||||
Find proteins for P14583 (Rice dwarf virus (isolate Akita)) Explore P14583  Go to UniProtKB:  P14583 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P14583 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
5GP Query on 5GP | C [auth A], D [auth B] | GUANOSINE-5'-MONOPHOSPHATE C10 H14 N5 O8 P RQFCJASXJCIDSX-UUOKFMHZSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 76.814 | α = 90 |
b = 122.631 | β = 90 |
c = 192.262 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
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JSPS | Japan | JP25251009 |