Download MendeleyCrystal structure of beta-ketoacyl-ACP synthase III (FabH) from Neisseria meningitidis
Nanson, J.D., Forwood, J.K.To be published.
4RYB
Crystal structure of beta-ketoacyl-ACP synthase III (FabH) from Neisseria meningitidis
- PDB DOI: https://doi.org/10.2210/pdb4RYB/pdb
- Classification: TRANSFERASE
- Organism(s): Neisseria meningitidis FAM18
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2014-12-14 Released: 2014-12-31
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.45 Å
- R-Value Free: 0.232
- R-Value Work: 0.202
- R-Value Observed: 0.203
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 | 320 | Neisseria meningitidis FAM18 | Mutation(s): 0 Gene Names: fabH EC: 2.3.1.180 |  | |
UniProt | |||||
Find proteins for A1KRY9 (Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18)) Explore A1KRY9 Go to UniProtKB: A1KRY9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A1KRY9 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | C [auth B], D [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| CSD Query on CSD | A, B | L-PEPTIDE LINKING | C3 H7 N O4 S |  | CYS |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.45 Å
- R-Value Free: 0.232
- R-Value Work: 0.202
- R-Value Observed: 0.203
- Space Group: C 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 66.29 | α = 90 |
| b = 96.36 | β = 90 |
| c = 193.02 | γ = 90 |
| Software Name | Purpose |
|---|---|
| Blu-Ice | data collection |
| PHASER | phasing |
| PHENIX | refinement |
| XDS | data reduction |
| Aimless | data scaling |
Entry History
Deposition Data
- Released Date: 2014-12-31 Deposition Author(s): Nanson, J.D., Forwood, J.K.
Revision History (Full details and data files)
- Version 1.0: 2014-12-31
Type: Initial release - Version 1.1: 2023-11-08
Changes: Data collection, Database references, Derived calculations, Refinement description - Version 1.2: 2024-10-09
Changes: Structure summary
