Crystal structure of wild type and d78n mutant clavibacter michiganensis expansin, in apo form and in complex with oligosaccharides
Yennawar, N.H., Yennawar, H.P., Georgelis, N., Cosgrove, D.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
cellulose binding protein | A, B [auth C] | 202 | Clavibacter michiganensis subsp. michiganensis NCPPB 382 | Mutation(s): 1  Gene Names: celA, pCM1_0020 EC: 3.2.1.4 | ![]() |
UniProt | |||||
Find proteins for A5CLK3 (Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)) Explore A5CLK3  Go to UniProtKB:  A5CLK3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A5CLK3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose | C [auth B], D | 6 | N/A | ||
Glycosylation Resources | |||||
GlyTouCan:  G09454VW GlyCosmos:  G09454VW GlyGen:  G09454VW |
Entity ID: 2 | |||||
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ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_900020 Query on PRD_900020 | C [auth B], D | beta-cellohexaose | Oligosaccharide / Metabolism |
Length ( Å ) | Angle ( ˚ ) |
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a = 65.758 | α = 90 |
b = 34.555 | β = 95.57 |
c = 81.144 | γ = 90 |
Software Name | Purpose |
---|---|
CrystalClear | data collection |
PHENIX | model building |
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHENIX | phasing |