Salmonella typhi OmpF complex with Daunomycin
Madhuranayaki, T., Balasubramaniam, D., Krishnaswamy, S.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Outer membrane protein F | 341 | Salmonella enterica subsp. enterica serovar Typhi | Mutation(s): 0  Gene Names: ompF Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for P37432 (Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)) Explore P37432  Go to UniProtKB:  P37432 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P37432 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
DM1 Query on DM1 | D [auth C] | DAUNOMYCIN C27 H29 N O10 STQGQHZAVUOBTE-VGBVRHCVSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 84.714 | α = 90 |
b = 132.39 | β = 90 |
c = 150.022 | γ = 90 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
PHASER | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
HKL-2000 | data reduction |
HKL-2000 | data scaling |