Protein-protein interactions in nfkb pathway: novel tools to promote apoptosis in cancer therapy
Cossu, F., Milani, M., Grassi, S., Malvezzi, F., Corti, A., Bolognesi, M., Mastrangelo, E.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
E3 ubiquitin-protein ligase XIAP | 111 | Homo sapiens | Mutation(s): 0  Gene Names: XIAP, API3, BIRC4, IAP3 EC: 6.3.2 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P98170 (Homo sapiens) Explore P98170  Go to UniProtKB:  P98170 | |||||
PHAROS:  P98170 GTEx:  ENSG00000101966  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P98170 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
0BU Query on 0BU | I [auth C], K [auth D] | 8-({3-[({3-[(4,6,8-trisulfonaphthalen-1-yl)carbamoyl]phenyl}carbamoyl)amino]benzoyl}amino)naphthalene-1,3,5-trisulfonic
acid C35 H26 N4 O21 S6 JMONOAYAUIIKMS-UHFFFAOYSA-N | |||
SO4 Query on SO4 | G [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
ZN Query on ZN | E [auth A], F [auth B], H [auth C], J [auth D] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 36.854 | α = 90 |
b = 76.209 | β = 90 |
c = 71.191 | γ = 90 |
Software Name | Purpose |
---|---|
DNA | data collection |
MOLREP | phasing |
REFMAC | refinement |
MOSFLM | data reduction |
SCALA | data scaling |