4HDE

The crystal structure of a SCO1/SenC family lipoprotein from Bacillus anthracis str. Ames

• PDB DOI: https://doi.org/10.2210/pdb4HDE/pdb

• Classification: LIPID BINDING PROTEIN
• Organism(s): Bacillus anthracis
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2012-10-02 Released: 2012-10-24 
• Deposition Author(s): Tan, K., Zhou, M., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

---

Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.32 Å
• R-Value Free: 0.185 
• R-Value Work: 0.162 
• R-Value Observed: 0.163 

Literature

The crystal structure of a SCO1/SenC family lipoprotein from Bacillus anthracis str. Ames

Tan, K., Zhou, M., Kwon, K., Anderson, W.F., Joachimiak, A.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 19.83 kDa 
• Atom Count: 1,636 
• Modelled Residue Count: 168 
• Deposited Residue Count: 170 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
SCO1/SenC family lipoprotein	A	170	Bacillus anthracis	Mutation(s): 0  Gene Names: BAS2093, BA_2249, GBAA_2249
UniProt
Find proteins for A0A6L7H5L6 (Bacillus anthracis) Explore A0A6L7H5L6  Go to UniProtKB:  A0A6L7H5L6

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.32 Å
• R-Value Free: 0.185 
• R-Value Work: 0.162 
• R-Value Observed: 0.163 
• Space Group: P 2₁ 2₁ 2₁
• Diffraction Data: https://doi.org/10.18430/m34hde

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 34.985	α = 90
b = 48.468	β = 90
c = 88.551	γ = 90

Software Package:

Software Name	Purpose
SBC-Collect	data collection
SHELXD	phasing
MLPHARE	phasing
DM	model building
ARP	model building
WARP	model building
HKL-3000	phasing
PHENIX	refinement
HKL-3000	data reduction
HKL-3000	data scaling
DM	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2012-10-24 
Deposition Author(s): Tan, K., Zhou, M., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History  

• Version 1.0: 2012-10-24
  Type: Initial release
  
• Version 1.1: 2024-10-09
  Changes: Data collection, Database references, Derived calculations, Structure summary