tructural Basis for Tetramerization-dependent Gene Repression by Histone Demethylase NO66
Tao, Y., Wu, M., Sinha, K.M., Zang, J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Lysine-specific demethylase NO66 | 463 | Homo sapiens | Mutation(s): 0  Gene Names: C14orf169, NO66 EC: 1.14.11.27 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9H6W3 (Homo sapiens) Explore Q9H6W3  Go to UniProtKB:  Q9H6W3 | |||||
PHAROS:  Q9H6W3 GTEx:  ENSG00000170468  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9H6W3 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PEG Query on PEG | J [auth C] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
GOL Query on GOL | I [auth C] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
ACT Query on ACT | F [auth A] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
FE Query on FE | E [auth A], G [auth B], H [auth C], K [auth D] | FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 89.352 | α = 90 |
b = 89.352 | β = 90 |
c = 304.863 | γ = 120 |
Software Name | Purpose |
---|---|
ADSC | data collection |
PHASER | phasing |
REFMAC | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |