Crystal structure of Tryptophanyl-tRNA synthetase from Vibrio cholerae with an endogenous tryptophan
Cooper, D.R., Kudritska, M., Chruszcz, M., Grabowski, M., Anderson, W.F., Minor, W.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Tryptophanyl-tRNA synthetase | 341 | Vibrio cholerae O1 biovar El Tor str. N16961 | Mutation(s): 0  Gene Names: trpS, VC_2623 EC: 6.1.1.2 | ![]() | |
UniProt | |||||
Find proteins for Q9KNV7 (Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)) Explore Q9KNV7  Go to UniProtKB:  Q9KNV7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9KNV7 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
TRP Query on TRP | B [auth A] | TRYPTOPHAN C11 H12 N2 O2 QIVBCDIJIAJPQS-VIFPVBQESA-N | |||
GOL Query on GOL | C [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 76.02 | α = 90 |
b = 94.047 | β = 90 |
c = 47.036 | γ = 90 |
Software Name | Purpose |
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DENZO | data reduction |
SCALEPACK | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
HKL-3000 | data collection |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
MOLREP | phasing |