Putative ATP-dependent DNA ligase from Aquifex aeolicus.
Osipiuk, J., Quartey, P., Collart, F., Joachimiak, A.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA ligase | 370 | Aquifex aeolicus | Mutation(s): 0  Gene Names: aq_1106 | ![]() | |
UniProt | |||||
Find proteins for O67191 (Aquifex aeolicus (strain VF5)) Explore O67191  Go to UniProtKB:  O67191 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O67191 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ADN Query on ADN | C [auth A], F [auth B] | ADENOSINE C10 H13 N5 O4 OIRDTQYFTABQOQ-KQYNXXCUSA-N | |||
GOL Query on GOL | E [auth A], H [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
CA Query on CA | D [auth A], G [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 91.366 | α = 90 |
b = 99.165 | β = 90 |
c = 103.278 | γ = 90 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
SBC-Collect | data collection |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
MOLREP | phasing |