Structure of probable D-alanine-poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes with ATP
Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
D-alanine--poly(phosphoribitol) ligase subunit 1 | 521 | Streptococcus pyogenes M1 GAS | Mutation(s): 0  Gene Names: dltA, M5005_Spy1073, SPy_1312 EC: 6.1.1.13 | ![]() | |
UniProt | |||||
Find proteins for Q99ZA6 (Streptococcus pyogenes serotype M1) Explore Q99ZA6  Go to UniProtKB:  Q99ZA6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q99ZA6 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ATP Query on ATP | E [auth A], F [auth B], G [auth C], H [auth D] | ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 ZKHQWZAMYRWXGA-KQYNXXCUSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 174.41 | α = 90 |
b = 174.41 | β = 90 |
c = 176.065 | γ = 90 |
Software Name | Purpose |
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DENZO | data reduction |
SCALEPACK | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
ADSC | data collection |
HKL-2000 | data reduction |
MOLREP | phasing |