3KS9

Metabotropic glutamate receptor mGluR1 complexed with LY341495 antagonist


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.90 Å
  • R-Value Free: 0.241 
  • R-Value Work: 0.206 
  • R-Value Observed: 0.207 

Starting Model: experimental
View more details

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.5 of the entry. See complete history


Literature

Metabotropic glutamate receptor mglur1 complexed with LY341495 antagonist

Dobrovetsky, E.Khutoreskaya, G.Seitova, A.Cossar, D.Edwards, A.M.Arrowsmith, C.H.Bountra, C.Weigelt, J.Bochkarev, A.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Metabotropic glutamate receptor 1
A, B
496Homo sapiensMutation(s): 1 
Gene Names: GPRC1AGRM1MGLUR1
UniProt & NIH Common Fund Data Resources
Find proteins for Q13255 (Homo sapiens)
Explore Q13255 
Go to UniProtKB:  Q13255
PHAROS:  Q13255
GTEx:  ENSG00000152822 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ13255
Glycosylation
Glycosylation Sites: 2Go to GlyGen: Q13255-1
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Binding Affinity Annotations 
IDSourceBinding Affinity
Z99 BindingDB:  3KS9 Ki: 6800 (nM) from 1 assay(s)
IC50: min: 7800, max: 8990 (nM) from 2 assay(s)
EC50: 1.00e+5 (nM) from 1 assay(s)
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.90 Å
  • R-Value Free: 0.241 
  • R-Value Work: 0.206 
  • R-Value Observed: 0.207 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 79.23α = 90
b = 96.546β = 106.67
c = 97.545γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
MOLREPphasing
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 


Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2009-12-08
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Non-polymer description, Version format compliance
  • Version 1.2: 2017-11-01
    Changes: Refinement description
  • Version 1.3: 2020-07-29
    Type: Remediation
    Reason: Carbohydrate remediation
    Changes: Data collection, Database references, Derived calculations, Structure summary
  • Version 1.4: 2021-10-13
    Changes: Database references, Structure summary
  • Version 1.5: 2023-09-06
    Changes: Data collection, Refinement description