6-phosphogluconolactonase from Plasmodium vivax
Arakaki, T.L., Merritt, E.A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Glucose-6-phosphate 1-dehydrogenase | 312 | Plasmodium vivax | Mutation(s): 0  Gene Names: PVX_117790 EC: 3.1.1.31 | ![]() | |
UniProt | |||||
Find proteins for A5K3M1 (Plasmodium vivax (strain Salvador I)) Explore A5K3M1  Go to UniProtKB:  A5K3M1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A5K3M1 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
AZI Query on AZI | G [auth A], I [auth B], K [auth C], N [auth D] | AZIDE ION N3 IVRMZWNICZWHMI-UHFFFAOYSA-N | |||
K Query on K | F [auth A], H [auth B], J [auth C], M [auth D] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N | |||
CL Query on CL | E [auth A], L [auth D] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 46.524 | α = 63.98 |
b = 80.846 | β = 88.1 |
c = 89.765 | γ = 80.01 |
Software Name | Purpose |
---|---|
MOSFLM | data reduction |
SCALA | data scaling |
SOLVE | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |