Citrullination-and mhc polymorphism-dependent conformational changes of a self peptide
Beltrami, A., Gabdulkhakov, A., Rossmann, M., Ziegler, A., Uchanska-Ziegler, B., Saenger, W.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
MHC class I antigen (Fragment) | 276 | Homo sapiens | Mutation(s): 0  Gene Names: HLA-B | ![]() | |
UniProt | |||||
Find proteins for A3F718 (Homo sapiens) Explore A3F718  Go to UniProtKB:  A3F718 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A3F718 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Beta-2-microglobulin | 100 | Homo sapiens | Mutation(s): 0  Gene Names: B2M, CDABP0092, HDCMA22P | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P61769 (Homo sapiens) Explore P61769  Go to UniProtKB:  P61769 | |||||
PHAROS:  P61769 GTEx:  ENSG00000166710  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P61769 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Double citrullinated vasoactive intestinal polypeptide receptor | 9 | N/A | Mutation(s): 0  | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P32241 (Homo sapiens) Explore P32241  Go to UniProtKB:  P32241 | |||||
PHAROS:  P32241 GTEx:  ENSG00000114812  | |||||
Entity Groups   | |||||
UniProt Group | P32241 | ||||
Sequence AnnotationsExpand | |||||
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Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
CIR Query on CIR | C | L-PEPTIDE LINKING | C6 H13 N3 O3 | ARG |
Length ( Å ) | Angle ( ˚ ) |
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a = 50.842 | α = 90 |
b = 81.931 | β = 108.88 |
c = 65.771 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
HKL-2000 | data collection |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
MOLREP | phasing |