BlaC-Specific Fluorogenic Probes for Rapid Tuberculosis Detection
Xie, H., Mire, J.A., Kong, Y., Chang, M., Sacchettini, J.C., Cirillo, J.D., Rao, J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Beta-lactamase | 285 | Mycobacterium tuberculosis | Mutation(s): 1  Gene Names: blaA, blaC, MT2128, MTCY49.07c, Rv2068c EC: 3.5.2.6 | ||
UniProt | |||||
Find proteins for P9WKD3 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WKD3  Go to UniProtKB:  P9WKD3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P9WKD3 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CD8 Query on CD8 | E [auth A], F [auth B], H [auth C], J [auth D] | (2R)-2-[(1S)-1-(benzoylamino)-1-methoxy-2-oxoethyl]-5-methylidene-5,6-dihydro-2H-1,3-thiazine-4-carboxylic acid C16 H16 N2 O5 S DDPBNTJUSOYARI-CVEARBPZSA-N | |||
PO4 Query on PO4 | G [auth B], I [auth C], K [auth D] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 80.061 | α = 90 |
b = 96.603 | β = 107.69 |
c = 108.555 | γ = 90 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
HKL-3000 | data collection |
SCALEPACK | data scaling |
PHASER | phasing |