Crystal structure of Tm1821, the 8-oxoguanine DNA glycosylase of Thermotoga maritima
Cooper, D.R., Roy, A., Derewenda, Z.S.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Probable N-glycosylase/DNA lyase | 219 | Thermotoga maritima | Mutation(s): 0  Gene Names: ogg, Tm1821, TM_1821 EC: 3.2.2 (PDB Primary Data), 4.2.99.18 (PDB Primary Data) | ||
UniProt | |||||
Find proteins for Q9X2E1 (Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)) Explore Q9X2E1  Go to UniProtKB:  Q9X2E1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9X2E1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NA Query on NA | D [auth A], E [auth B], F [auth C] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 54.871 | α = 90 |
b = 93.635 | β = 90 |
c = 135.895 | γ = 90 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
AMoRE | phasing |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
SERGUI | data collection |
HKL-2000 | data reduction |