Crystal structure of putative carboxynorspermidine decarboxylase protein from Sinorhizobium meliloti
Chang, C., Xu, X., Cui, H., Chin, S., Savchenko, A., Edwards, A., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Putative carboxynorspermidine decarboxylase protein | 365 | Sinorhizobium meliloti | Mutation(s): 0  Gene Names: nspC, RB1551, SM_b21631, SMb21631 EC: 4.1.1 (PDB Primary Data), 4.1.1.96 (UniProt) | ||
UniProt | |||||
Find proteins for Q92TG9 (Rhizobium meliloti (strain 1021)) Explore Q92TG9  Go to UniProtKB:  Q92TG9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q92TG9 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | C [auth A], D [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 69.769 | α = 90 |
b = 75.773 | β = 90 |
c = 129.801 | γ = 90 |
Software Name | Purpose |
---|---|
SBC-Collect | data collection |
HKL-3000 | phasing |
SHELXD | phasing |
SHELXE | model building |
MLPHARE | phasing |
DM | model building |
RESOLVE | model building |
Coot | model building |
ARP/wARP | model building |
REFMAC | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
DM | phasing |
RESOLVE | phasing |