3LJN

Ankyrin repeat protein from Leishmania major

• PDB DOI: https://doi.org/10.2210/pdb3LJN/pdb

• Classification: UNKNOWN FUNCTION
• Organism(s): Leishmania major strain Friedlin
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2010-01-26 Released: 2010-02-09 
• Deposition Author(s): Holmes, M.A., Merritt, E.A., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.90 Å
• R-Value Free: 0.295 
• R-Value Work: 0.229 

Literature

Ankyrin repeat protein from Leishmania major

Merritt, E.A., Holmes, M.A., Napuli, A., Kalyuzhniy, O., Van Voorhis, W.C., Buckner, F.S., Fan, E., Zucker, F., Verlinde, L.M.J., Hol, W.G.J.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 41.12 kDa 
• Atom Count: 2,355 
• Modelled Residue Count: 304 
• Deposited Residue Count: 364 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
hypothetical protein	A	364	Leishmania major strain Friedlin	Mutation(s): 0  Gene Names: LmjF29.1100, LMJ_0751
UniProt
Find proteins for E9ADW8 (Leishmania major) Explore E9ADW8  Go to UniProtKB:  E9ADW8

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.90 Å
• R-Value Free: 0.295 
• R-Value Work: 0.229 
• Space Group: P 2₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 57.293	α = 90
b = 85.656	β = 90
c = 76.814	γ = 90

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
REFMAC	refinement
PDB_EXTRACT	data extraction
SOLVE	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2010-02-09 
Deposition Author(s): Holmes, M.A., Merritt, E.A., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

Revision History  

• Version 1.0: 2010-02-09
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2017-11-01
  Changes: Refinement description