Crystal structure of porcine pancreatic phospholipase A2 complexed with dihydroxyberberine
Naveen, C., Prasanth, G.K., Abhilash, J., Pradeep, M., Ponnuraj, K., Sadasivan, C., Haridas, M.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Phospholipase A2, major isoenzyme | 124 | Sus scrofa | Mutation(s): 0  EC: 3.1.1.4 | ||
UniProt | |||||
Find proteins for P00592 (Sus scrofa) Explore P00592  Go to UniProtKB:  P00592 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00592 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
DBW Query on DBW | E [auth A] | 4,14-dihydro-8H-[1,3]dioxolo[4,5-g]isoquino[3,2-a]isoquinoline-9,10-diol C18 H15 N O4 LCTIMSLMTIKISI-UHFFFAOYSA-N | |||
CA Query on CA | B [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
CL Query on CL | C [auth A], D [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 68.88 | α = 90 |
b = 68.88 | β = 90 |
c = 70.16 | γ = 120 |
Software Name | Purpose |
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SCALA | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
MAR345dtb | data collection |
AUTOMAR | data reduction |
MOLREP | phasing |