Kinase Domain of Human Ephrin Type-A Receptor 8 (Epha8)
Walker, J.R., Yermekbayeva, L., Kania, J., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Ephrin type-A receptor 8 | 325 | Homo sapiens | Mutation(s): 0  Gene Names: EEK, EPHA8, HEK3, KIAA1459 EC: 2.7.10.1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P29322 (Homo sapiens) Explore P29322  Go to UniProtKB:  P29322 | |||||
PHAROS:  P29322 GTEx:  ENSG00000070886  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P29322 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Ephrin type-A receptor 8 | 325 | Homo sapiens | Mutation(s): 0  Gene Names: EEK, EPHA8, HEK3, KIAA1459 EC: 2.7.10.1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P29322 (Homo sapiens) Explore P29322  Go to UniProtKB:  P29322 | |||||
PHAROS:  P29322 GTEx:  ENSG00000070886  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P29322 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | C [auth A], F [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
GOL Query on GOL | E [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
BME Query on BME | D [auth A], G [auth B] | BETA-MERCAPTOETHANOL C2 H6 O S DGVVWUTYPXICAM-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
PTR Query on PTR | B | L-PEPTIDE LINKING | C9 H12 N O6 P | TYR |
Length ( Å ) | Angle ( ˚ ) |
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a = 44.14 | α = 90 |
b = 41.879 | β = 92.46 |
c = 145.815 | γ = 90 |
Software Name | Purpose |
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HKL-2000 | data collection |
PHASER | phasing |
REFMAC | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |