Crystal Structure of Human Orotidine 5'-monophosphate Decarboxylase Complexed with 5-CN-UMP
Liu, Y., Tang, H.L., Avina, M.E.M., Kotra, L.P., Pai, E.F.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Uridine 5'-monophosphate synthase | 279 | Homo sapiens | Mutation(s): 0  Gene Names: UMPS EC: 4.1.1.23 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P11172 (Homo sapiens) Explore P11172  Go to UniProtKB:  P11172 | |||||
PHAROS:  P11172 GTEx:  ENSG00000114491  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P11172 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CNU Query on CNU | E [auth A], H [auth B] | 5-CYANO-URIDINE-5'-MONOPHOSPHATE C10 H12 N3 O9 P BUHKUGLYORHFNN-JXOAFFINSA-N | |||
SO4 Query on SO4 | C [auth A], D [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
GOL Query on GOL | F [auth A], G [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 69.552 | α = 90 |
b = 61.554 | β = 111.81 |
c = 70.989 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
MxDC | data collection |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
MOLREP | phasing |
Coot | model building |