Crystal structure of YmaH (Hfq) from Bacillus subtilis in complex with an RNA aptamer.
Someya, T., Baba, S., Fujimoto, M., Kumasaka, T., Kawai, G., Nakamura, K.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Protein hfq | 78 | Bacillus subtilis | Mutation(s): 0  Gene Names: BSU17340, hfq, ymaH | ||
UniProt | |||||
Find proteins for O31796 (Bacillus subtilis (strain 168)) Explore O31796  Go to UniProtKB:  O31796 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O31796 | ||||
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
5'-R(*AP*GP*AP*GP*AP*G)-3' | D [auth X] | 6 | N/A | ||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
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a = 91.921 | α = 90 |
b = 92.504 | β = 90 |
c = 114.918 | γ = 90 |
Software Name | Purpose |
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BSS | data collection |
MOLREP | phasing |
CNS | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |