Structural determinant for switching between the polymerase and exonuclease modes in the PCNA-replicative DNA polymerase complex
Nishida, H., Mayanagi, K., Kiyonari, S., Sato, Y., Ishino, Y., Morikawa, K.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA polymerase | 775 | Pyrococcus furiosus | Mutation(s): 0  Gene Names: pol, PF0212 EC: 2.7.7.7 | ||
UniProt | |||||
Find proteins for P61875 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)) Explore P61875  Go to UniProtKB:  P61875 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P61875 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA polymerase sliding clamp | 248 | Pyrococcus furiosus | Mutation(s): 3  Gene Names: pcn, PF0983 | ||
UniProt | |||||
Find proteins for O73947 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)) Explore O73947  Go to UniProtKB:  O73947 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O73947 | ||||
Sequence AnnotationsExpand | |||||
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Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 77.354 | α = 90 |
b = 90.451 | β = 90 |
c = 186.211 | γ = 90 |
Software Name | Purpose |
---|---|
CNS | refinement |
HKL-2000 | data collection |
HKL-2000 | data reduction |
SCALEPACK | data scaling |
SOLVE | phasing |