Crystal structure of the complex of buffalo Lactoperoxidase with fluoride ion at 3.5A resolution
Sheikh, I.A., Jain, R., Singh, N., Sharma, S., Bhushan, A., Kaur, P., Srinivasan, A., Singh, T.P.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Lactoperoxidase | 595 | Bubalus bubalis | Mutation(s): 0  EC: 1.11.1.7 | ![]() | |
UniProt | |||||
Find proteins for A5JUY8 (Bubalus bubalis) Explore A5JUY8  Go to UniProtKB:  A5JUY8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A5JUY8 | ||||
Glycosylation | |||||
Glycosylation Sites: 4 | |||||
Sequence AnnotationsExpand | |||||
|
Ligands 5 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
HEM Query on HEM | S [auth A] | PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L | |||
IOD Query on IOD | G [auth A] H [auth A] I [auth A] J [auth A] K [auth A] | IODIDE ION I XMBWDFGMSWQBCA-UHFFFAOYSA-M | |||
OSM Query on OSM | T [auth A] | 1-(OXIDOSULFANYL)METHANAMINE C H5 N O S KONFWJXIYYGXOO-UHFFFAOYSA-N | |||
CA Query on CA | F [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
F Query on F | P [auth A], Q [auth A], R [auth A] | FLUORIDE ION F KRHYYFGTRYWZRS-UHFFFAOYSA-M |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
SEP Query on SEP | A | L-PEPTIDE LINKING | C3 H8 N O6 P | SER |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 54.127 | α = 90 |
b = 80.739 | β = 102.94 |
c = 77.699 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
MAR345dtb | data collection |
AUTOMAR | data reduction |
SCALEPACK | data scaling |
AMoRE | phasing |