The crystal structure of a domain of protein VP0806 (unknown function) from Vibrio parahaemolyticus RIMD 2210633.
Tan, K., Wu, R., Abdullah, J., Freeman, L., Joachimiak, A.To be published.
Experimental Data Snapshot
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Uncharacterized protein VP0806 | 176 | Vibrio parahaemolyticus RIMD 2210633 | Mutation(s): 0  Gene Names: VP0806 | ![]() | |
UniProt | |||||
Find proteins for Q87RI8 (Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)) Explore Q87RI8  Go to UniProtKB:  Q87RI8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q87RI8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MES Query on MES | C [auth A], G [auth B], H [auth B], I [auth B] | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID C6 H13 N O4 S SXGZJKUKBWWHRA-UHFFFAOYSA-N | |||
EDO Query on EDO | D [auth A], E [auth A], J [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
ACT Query on ACT | F [auth B] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
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a = 53.001 | α = 90 |
b = 116.476 | β = 88.75 |
c = 62.224 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
SBC-Collect | data collection |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
MLPHARE | phasing |
DM | phasing |
HKL-3000 | phasing |