2JV7

NMR Solution Structure of Histoplasma capsulatum CBP Homodimer


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 40 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

NMR structure of a fungal virulence factor reveals structural homology with mammalian saposin B.

Beck, M.R.Dekoster, G.T.Cistola, D.P.Goldman, W.E.

(2009) Mol Microbiol 72: 344-353

  • DOI: https://doi.org/10.1111/j.1365-2958.2009.06647.x
  • Primary Citation of Related Structures:  
    2JV7

  • PubMed Abstract: 

    The fungal protein CBP (calcium binding protein) is a known virulence factor with an unknown virulence mechanism. The protein was identified based on its ability to bind calcium and its prevalence as Histoplasma capsulatum's most abundant secreted protein. However, CBP has no sequence homology with other CBPs and contains no known calcium binding motifs. Here, the NMR structure of CBP reveals a highly intertwined homodimer and represents the first atomic level NMR model of any fungal virulence factor. Each CBP monomer is comprised of four alpha-helices that adopt the saposin fold, characteristic of a protein family that binds to membranes and lipids. This structural homology suggests that CBP functions as a lipid binding protein, potentially interacting with host glycolipids in the phagolysosome of host cells.


  • Organizational Affiliation

    Department of Molecular Microbiology, Washington University in St Louis, St Louis, MO, USA.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Calcium-binding protein
A, B
78Histoplasma capsulatumMutation(s): 0 
UniProt
Find proteins for O42720 (Ajellomyces capsulatus (strain G186AR / H82 / ATCC MYA-2454 / RMSCC 2432))
Explore O42720 
Go to UniProtKB:  O42720
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO42720
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 40 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2008-09-23
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2022-03-16
    Changes: Database references, Derived calculations