2GD3

NMR structure of S14G-humanin in 30% TFE solution


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 300 
  • Conformers Submitted: 14 
  • Selection Criteria: 14 convergent conformers are presented having the lowest energy and the best structural quality in Ramachadran plot 

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This is version 1.3 of the entry. See complete history


Literature

Solution structure of Ser14Gly-humanin, a potent rescue factor against neuronal cell death in Alzheimer's disease.

Benaki, D.Zikos, C.Evangelou, A.Livaniou, E.Vlassi, M.Mikros, E.Pelecanou, M.

(2006) Biochem Biophys Res Commun 349: 634-642

  • DOI: https://doi.org/10.1016/j.bbrc.2006.08.087
  • Primary Citation of Related Structures:  
    2GD3

  • PubMed Abstract: 

    The NMR solution study of Ser14Gly-humanin (S14G-HN), a 1000-fold more potent derivative of humanin (HN), is reported. HN is 24-residue peptide that selectively suppresses neuronal cell death caused by Alzheimer's disease (AD)-specific insults and offers hope for the development of a cure against AD. In aqueous solution the NMR data show that S14G-HN is a flexible peptide with turn-like structures in its conformational ensemble distributed over an extensive part of its sequence from Pro3 to Glu15. In the more lipophilic environment of 30% TFE, an alpha-helical structure spanning residues Phe6 to Thr13 is identified. Comparison of these findings to the NMR structure of the parent HN and to existing structure-function relationship literature data outlines the important for activity structural features for this class of neuroprotective peptides, and brings forth flexibility as an important characteristic that may facilitate interactions with functional counterparts of the neuroprotection pathway.


  • Organizational Affiliation

    Institute of Biology, NCSR Demokritos 15310 Athens, Greece.


Macromolecules

Find similar proteins by:  Sequence   |   3D Structure  

Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Humanin24N/AMutation(s): 1 
UniProt & NIH Common Fund Data Resources
Find proteins for Q8IVG9 (Homo sapiens)
Explore Q8IVG9 
Go to UniProtKB:  Q8IVG9
PHAROS:  Q8IVG9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8IVG9
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 300 
  • Conformers Submitted: 14 
  • Selection Criteria: 14 convergent conformers are presented having the lowest energy and the best structural quality in Ramachadran plot 

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2006-09-19
    Type: Initial release
  • Version 1.1: 2008-05-01
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2021-10-20
    Changes: Data collection, Database references, Derived calculations