Structural Basis for Flexible Base Recognition by C/Ebpbeta
Tahirov, T.H., Inoue-Bungo, T., Sato, K., Shiina, M., Hamada, K., Ogata, K.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
CCAAT/enhancer-binding protein beta | C [auth A], D [auth B] | 78 | Homo sapiens | Mutation(s): 1  Gene Names: CEBPB, TCF5 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P17676 (Homo sapiens) Explore P17676  Go to UniProtKB:  P17676 | |||||
PHAROS:  P17676 GTEx:  ENSG00000172216  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P17676 | ||||
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 1 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(P*DTP*DAP*DGP*DGP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DAP*DT)-3') | A [auth C] | 16 | N/A | ![]() | |
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(P*DAP*DAP*DTP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DCP*DCP*DT)-3') | B [auth D] | 16 | N/A | ![]() | |
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
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a = 101.681 | α = 90 |
b = 112.731 | β = 90 |
c = 74.932 | γ = 90 |
Software Name | Purpose |
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CNS | refinement |
HKL-2000 | data reduction |
SCALEPACK | data scaling |
CNS | phasing |