2KYG

Structure of the AML1-ETO Nervy Domain - PKA(RIIa) complex and its contribution to AML1-ETO activity


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 15 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation   3D Report Full Report


This is version 1.4 of the entry. See complete history


Literature

Structure of the AML1-ETO NHR3-PKA(RIIalpha) complex and its contribution to AML1-ETO activity.

Corpora, T.Roudaia, L.Oo, Z.M.Chen, W.Manuylova, E.Cai, X.Chen, M.J.Cierpicki, T.Speck, N.A.Bushweller, J.H.

(2010) J Mol Biol 402: 560-577

  • DOI: https://doi.org/10.1016/j.jmb.2010.08.007
  • Primary Citation of Related Structures:  
    2KYG

  • PubMed Abstract: 

    AML1-ETO is the chimeric protein product of t(8;21) in acute myeloid leukemia. The ETO portion of the fusion protein includes the nervy homology region (NHR) 3 domain, which shares homology with A-kinase anchoring proteins and interacts with the regulatory subunit of type II cAMP-dependent protein kinase A (PKA(RIIα)). We determined the solution structure of a complex between the AML1-ETO NHR3 domain and PKA(RIIα). Based on this structure, a key residue in AML1-ETO for PKA(RIIα) association was mutated. This mutation did not disrupt AML1-ETO's ability to enhance the clonogenic capacity of primary mouse bone marrow cells or its ability to repress proliferation or granulocyte differentiation. Introduction of the mutation into AML1-ETO had minimal impact on in vivo leukemogenesis. Therefore, the NHR3-PKA(RIIα) protein interaction does not appear to significantly contribute to AML1-ETO's ability to induce leukemia.


  • Organizational Affiliation

    Department of Chemistry, University of Virginia, Charlottesville, VA 22906, USA.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
cAMP-dependent protein kinase type II-alpha regulatory subunit
A, B
50Homo sapiensMutation(s): 0 
Gene Names: PRKAR2APKR2PRKAR2
UniProt & NIH Common Fund Data Resources
Find proteins for P13861 (Homo sapiens)
Explore P13861 
Go to UniProtKB:  P13861
PHAROS:  P13861
GTEx:  ENSG00000114302 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP13861
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Protein CBFA2T138Homo sapiensMutation(s): 0 
Gene Names: RUNX1T1AML1T1CBFA2T1CDRETOMTG8ZMYND2
UniProt & NIH Common Fund Data Resources
Find proteins for Q06455 (Homo sapiens)
Explore Q06455 
Go to UniProtKB:  Q06455
PHAROS:  Q06455
GTEx:  ENSG00000079102 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ06455
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 15 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2010-10-20
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2020-02-05
    Changes: Data collection, Database references, Other
  • Version 1.3: 2023-06-14
    Changes: Database references, Other
  • Version 1.4: 2024-05-15
    Changes: Data collection, Database references