Atomic Structure of the kinetochore Spc24p/Spc25p globular domain reveals a novel fold
Wei, R.R., Harrison, S.C., Schnell, J.R., Chou, J.J.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Hypothetical 25.2 kDa protein in AFG3-SEB2 intergenic region | 90 | Saccharomyces cerevisiae | Mutation(s): 2  Gene Names: YER018C | ||
UniProt | |||||
Find proteins for P40014 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P40014  Go to UniProtKB:  P40014 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P40014 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Hypothetical 24.6 kDa protein in ILV2-ADE17 intergenic region | 64 | Saccharomyces cerevisiae | Mutation(s): 0  Gene Names: YMR117C, YM9718.16C | ||
UniProt | |||||
Find proteins for Q04477 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore Q04477  Go to UniProtKB:  Q04477 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q04477 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PO4 Query on PO4 | D [auth A] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
NA Query on NA | C [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 84.907 | α = 90 |
b = 84.907 | β = 90 |
c = 93.195 | γ = 90 |
Software Name | Purpose |
---|---|
HKL-2000 | data collection |
SCALEPACK | data scaling |
SOLVE | phasing |
REFMAC | refinement |
HKL-2000 | data reduction |