Crystal structure of the HBAF250B at-rich interaction domain (ARID)
Shimada, A., Niwa, H., Yokoyama, S.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
AT-rich interactive domain-containing protein 1B | 125 | Homo sapiens | Mutation(s): 0  Gene Names: HBAF250B | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q8NFD5 (Homo sapiens) Explore Q8NFD5  Go to UniProtKB:  Q8NFD5 | |||||
PHAROS:  Q8NFD5 GTEx:  ENSG00000049618  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8NFD5 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ZN Query on ZN | B [auth A], C [auth A], D [auth A], E [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
CL Query on CL | F [auth A], G [auth A], H [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 42.887 | α = 90 |
b = 42.887 | β = 90 |
c = 144.687 | γ = 90 |
Software Name | Purpose |
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CNS | refinement |
HKL-2000 | data collection |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
CNS | phasing |