Crystal Structure of the Complex Formed between Alkaline Proteinase Savinase and Gramicidin S at 1.5A Resolution.
Bhatt, V.S., Kaur, P., Klupsch, S., Betzel, C., Brenner, S., Singh, T.P.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
SUBTILISIN SAVINASE | 269 | Lederbergia lenta | Mutation(s): 0  EC: 3.4.21.62 | ![]() | |
UniProt | |||||
Find proteins for P29600 (Lederbergia lenta) Explore P29600  Go to UniProtKB:  P29600 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P29600 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
GRAMICIDIN S | 10 | Brevibacillus brevis | Mutation(s): 0  | ![]() | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CA Query on CA | C [auth A], D [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
ORN Query on ORN | B | L-PEPTIDE LINKING | C5 H12 N2 O2 | ALA |
Entity ID: 2 | |||||
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ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_000219 Query on PRD_000219 | B | GRAMICIDIN S | Cyclic peptide / Antibiotic |
Length ( Å ) | Angle ( ˚ ) |
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a = 76.25 | α = 90 |
b = 73.34 | β = 90 |
c = 40.89 | γ = 90 |
Software Name | Purpose |
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AMoRE | phasing |
REFMAC | refinement |
MOSFLM | data reduction |
CCP4 | data scaling |