1WJV

Solution structure of the N-terminal zinc finger domain of mouse cell growth regulating nucleolar protein LYAR

• PDB DOI: https://doi.org/10.2210/pdb1WJV/pdb
• BMRB: 11309

• Classification: DNA BINDING PROTEIN
• Organism(s): Mus musculus
• Mutation(s): No 


• Deposited: 2004-05-29 Released: 2004-11-29 
• Deposition Author(s): Yoneyama, M., Tochio, N., Koshiba, S., Inoue, M., Kigawa, T., Muto, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, target function 

Literature

Solution structure of the N-terminal zinc finger domain of mouse cell growth regulating nucleolar protein LYAR

Yoneyama, M., Tochio, N., Koshiba, S., Inoue, M., Kigawa, T., Muto, Y., Yokoyama, S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 8.54 kDa 
• Atom Count: 583 
• Modelled Residue Count: 79 
• Deposited Residue Count: 79 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Cell growth regulating nucleolar protein LYAR	A	79	Mus musculus	Mutation(s): 0  Gene Names: RIKEN cDNA 1700026C17
UniProt & NIH Common Fund Data Resources
Find proteins for Q08288 (Mus musculus) Explore Q08288  Go to UniProtKB:  Q08288
IMPC:  MGI:107470

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A], C [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2004-11-29 
Deposition Author(s): Yoneyama, M., Tochio, N., Koshiba, S., Inoue, M., Kigawa, T., Muto, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2004-11-29
  Type: Initial release
  
• Version 1.1: 2008-04-30
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-03-02
  Changes: Data collection, Database references, Derived calculations
• Version 1.4: 2024-05-29
  Changes: Data collection