Download MendeleyEffect of Unnatural Heme Substitution on Kinetics of Electron Transfer in Cytochrome C Peroxidase
Miller, M.A., Millett, F., Durham, B., Kraut, J., Mei, H.K., Ashford, V.A., Xuong, N.-H., Kraut, J.To be published.
1BEK
EFFECT OF UNNATURAL HEME SUBSTITUTION ON KINETICS OF ELECTRON TRANSFER IN CYTOCHROME C PEROXIDASE
- PDB DOI: https://doi.org/10.2210/pdb1BEK/pdb
- Classification: PEROXIDASE
- Organism(s): Saccharomyces cerevisiae
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 1998-05-16 Released: 1998-10-21
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| YEAST CYTOCHROME C PEROXIDASE | 291 | Saccharomyces cerevisiae | Mutation(s): 4 EC: 1.11.1.5 |  | |
UniProt | |||||
Find proteins for P00431 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P00431 Go to UniProtKB: P00431 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P00431 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| HEM Query on HEM | B [auth A] | PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 105.018 | α = 90 |
| b = 74.206 | β = 90 |
| c = 45.478 | γ = 90 |
| Software Name | Purpose |
|---|---|
| TNT | refinement |
Entry History
Deposition Data
- Released Date: 1998-10-21 Deposition Author(s): Miller, M.A., Kraut, J.
Revision History (Full details and data files)
- Version 1.0: 1998-10-21
Type: Initial release - Version 1.1: 2008-03-24
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2018-03-14
Changes: Database references, Other - Version 1.4: 2024-02-07
Changes: Data collection, Database references, Derived calculations
