Fragment-based Drug Discovery of inhibitors to block PDEdelta-RAS protein-protein interaction
Bing, X., Yanlian, L., Danyan, C.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta | A [auth B] | 150 | Homo sapiens | Mutation(s): 0  Gene Names: PDE6D, PDED | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O43924 (Homo sapiens) Explore O43924  Go to UniProtKB:  O43924 | |||||
PHAROS:  O43924 GTEx:  ENSG00000156973  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O43924 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
8SF (Subject of Investigation/LOI) Query on 8SF | B | 1-phenyl-5-propan-2-ylsulfanyl-1,2,3,4-tetrazole C10 H12 N4 S SRXNAOIEUJQDHS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 55.78 | α = 90 |
b = 55.78 | β = 90 |
c = 115.644 | γ = 120 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-2000 | data processing |
HKL-2000 | data scaling |
PHENIX | model building |