PanDDA analysis group deposition
Newman, J.A., Gavard, A.E., Fernandez-Cid, A., Sherestha, L., Burgess-Brown, N.A., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Gileadi, O.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
T-box transcription factor T | 172 | Homo sapiens | Mutation(s): 0  Gene Names: TBXT, T | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O15178 (Homo sapiens) Explore O15178  Go to UniProtKB:  O15178 | |||||
PHAROS:  O15178 GTEx:  ENSG00000164458  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O15178 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NXM (Subject of Investigation/LOI) Query on NXM | G [auth A] | 4-[(3-cyclopropyl-1,2,4-oxadiazol-5-yl)methyl]piperidine C11 H17 N3 O UMIHXIWIKFHJRW-UHFFFAOYSA-N | |||
CD Query on CD | B [auth A], C [auth A], D [auth A], E [auth A], F [auth A] | CADMIUM ION Cd WLZRMCYVCSSEQC-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 60.26 | α = 90 |
b = 60.26 | β = 90 |
c = 109.996 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
REFMAC | phasing |