Crystal Structure Analysis of the Human Leukocyte Antigen B*46:01
Liu, J.X.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
HLA class I histocompatibility antigen, B-46 alpha chain | A, D [auth F] | 274 | Homo sapiens | Mutation(s): 0  Gene Names: HLA, HLA-B, HLAB | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01889 (Homo sapiens) Explore P01889  Go to UniProtKB:  P01889 | |||||
PHAROS:  P01889 GTEx:  ENSG00000234745  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P01889 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Beta-2-microglobulin | B, E [auth H] | 100 | Homo sapiens | Mutation(s): 0  Gene Names: B2M, BETA 2 MICROGLOBULIN, CDABP0092, HDCMA22P | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P61769 (Homo sapiens) Explore P61769  Go to UniProtKB:  P61769 | |||||
PHAROS:  P61769 GTEx:  ENSG00000166710  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P61769 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
dengue1 poly peptide | C, F [auth J] | 9 | dengue virus type 1 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P17763 (Dengue virus type 1 (strain Nauru/West Pac/1974)) Explore P17763  Go to UniProtKB:  P17763 | |||||
Entity Groups   | |||||
UniProt Group | P17763 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NA Query on NA | G [auth A] H [auth A] I [auth B] J [auth F] K [auth F] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 49.95 | α = 90 |
b = 89.73 | β = 98.45 |
c = 94.62 | γ = 90 |
Software Name | Purpose |
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HKL-2000 | data collection |
AMoRE | phasing |
REFMAC | refinement |
HKL-2000 | data reduction |
SCALA | data scaling |