3R62

Structure of complement regulator Factor H mutant, T1184R.

• PDB DOI: https://doi.org/10.2210/pdb3R62/pdb

• Classification: IMMUNE SYSTEM
• Organism(s): Homo sapiens
• Expression System: Komagataella pastoris
• Mutation(s): Yes 


• Deposited: 2011-03-21 Released: 2011-06-29 
• Deposition Author(s): Morgan, H.P., Jiang, J., Herbert, A.P., Kavanagh, D., Uhran, D., Barlow, P.N., Hannan, J.P.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.52 Å
• R-Value Free: 0.208 
• R-Value Work: 0.178 
• R-Value Observed: 0.179 

Starting Model: experimental

Literature

Crystallographic determination of the disease-associated T1184R variant of the complement Factor H.

Morgan, H.P., Jiang, J., Herbert, A.P., Kavanagh, D., Uhran, D., Barlow, P.N., Hannan, J.P.

(2011) Acta Crystallogr D Biol Crystallogr 67: 593-600

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors.

Macromolecule Content

• Total Structure Weight: 29.75 kDa 
• Atom Count: 2,580 
• Modelled Residue Count: 252 
• Deposited Residue Count: 258 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Complement factor H	A, B	129	Homo sapiens	Mutation(s): 1  Gene Names: CFH, CFH complement factor H, HF, HF1, HF2
UniProt & NIH Common Fund Data Resources
Find proteins for P08603 (Homo sapiens) Explore P08603  Go to UniProtKB:  P08603
PHAROS:  P08603 GTEx:  ENSG00000000971

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
GOL	C [auth A]	GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.52 Å
• R-Value Free: 0.208 
• R-Value Work: 0.178 
• R-Value Observed: 0.179 
• Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 36.886	α = 90
b = 52.84	β = 90
c = 142.628	γ = 90

Software Package:

Software Name	Purpose
DNA	data collection
PHASES	phasing
REFMAC	refinement
MOSFLM	data reduction
SCALA	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2011-06-29 
Deposition Author(s): Morgan, H.P., Jiang, J., Herbert, A.P., Kavanagh, D., Uhran, D., Barlow, P.N., Hannan, J.P.

Revision History  

• Version 1.0: 2011-06-29
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2018-01-24
  Changes: Structure summary
• Version 1.3: 2023-09-13
  Changes: Data collection, Database references, Derived calculations, Refinement description