Discovery of a functionally selective serotonin 1A receptor agonist for the treatment of pain
Boettcher, B.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Guanine nucleotide-binding protein G(i) subunit alpha-1 | 354 | Homo sapiens | Mutation(s): 0  Gene Names: GNAI1 Membrane Entity: Yes  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P63096 (Homo sapiens) Explore P63096  Go to UniProtKB:  P63096 | |||||
PHAROS:  P63096 GTEx:  ENSG00000127955  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P63096 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | 352 | Homo sapiens | Mutation(s): 0  Gene Names: GNB1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P62873 (Homo sapiens) Explore P62873  Go to UniProtKB:  P62873 | |||||
PHAROS:  P62873 GTEx:  ENSG00000078369  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P62873 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | C [auth G] | 71 | Homo sapiens | Mutation(s): 0  Gene Names: GNG2 Membrane Entity: Yes  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P59768 (Homo sapiens) Explore P59768  Go to UniProtKB:  P59768 | |||||
PHAROS:  P59768 GTEx:  ENSG00000186469  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P59768 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
5-hydroxytryptamine receptor 1A | D [auth R] | 466 | Homo sapiens | Mutation(s): 0  Gene Names: HTR1A, ADRB2RL1, ADRBRL1 Membrane Entity: Yes  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P08908 (Homo sapiens) Explore P08908  Go to UniProtKB:  P08908 | |||||
PHAROS:  P08908 GTEx:  ENSG00000178394  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P08908 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
T7M Query on T7M | F [auth R] | (2R)-1-(heptadecanoyloxy)-3-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate C46 H82 O16 P2 WSLBJQQQZZTFBA-NPJVAJNNSA-N | |||
ZKV (Subject of Investigation/LOI) Query on ZKV | G [auth R] | (3-chloranyl-4-fluoranyl-phenyl)-[4-fluoranyl-4-[[(5-methylpyridin-2-yl)methylamino]methyl]piperidin-1-yl]methanone C20 H22 Cl F2 N3 O PKZXLMVXBZICTF-UHFFFAOYSA-N | |||
CLR Query on CLR | E [auth R] | CHOLESTEROL C27 H46 O HVYWMOMLDIMFJA-DPAQBDIFSA-N |
Task | Software Package | Version |
---|---|---|
MODEL REFINEMENT | PHENIX | |
RECONSTRUCTION | cryoSPARC | 4.0 |
Funding Organization | Location | Grant Number |
---|---|---|
iNEXT-Discovery | European Union | 24759 |
German Research Foundation (DFG) | Germany | INST 93/903-1 |
German Research Foundation (DFG) | Germany | INST 93/1042-1 |