Cannabinoid receptor 1-Gi complex with novel ligand
Tummino, T.A., Iliopoulos-Tsoutsouvas, C., Braz, J.M., O'Brien, E.S., Krishna Kumar, K., Makriyannis, M., Basbaum, A.I., Shoichet, B.K.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Guanine nucleotide-binding protein G(i) subunit alpha-1 | 354 | Homo sapiens | Mutation(s): 0  Gene Names: GNAI1 Membrane Entity: Yes  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P63096 (Homo sapiens) Explore P63096  Go to UniProtKB:  P63096 | |||||
PHAROS:  P63096 GTEx:  ENSG00000127955  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P63096 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | 338 | Homo sapiens | Mutation(s): 0  Gene Names: GNB1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P62873 (Homo sapiens) Explore P62873  Go to UniProtKB:  P62873 | |||||
PHAROS:  P62873 GTEx:  ENSG00000078369  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P62873 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | 71 | Homo sapiens | Mutation(s): 0  Gene Names: GNG2 Membrane Entity: Yes  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P59768 (Homo sapiens) Explore P59768  Go to UniProtKB:  P59768 | |||||
PHAROS:  P59768 GTEx:  ENSG00000186469  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P59768 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 4 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Cannabinoid receptor 1 | D [auth R] | 495 | Homo sapiens | Mutation(s): 0  Gene Names: CNR1, CNR Membrane Entity: Yes  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P21554 (Homo sapiens) Explore P21554  Go to UniProtKB:  P21554 | |||||
PHAROS:  P21554 GTEx:  ENSG00000118432  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P21554 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 5 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
scFv16 | E [auth S] | 259 | Mus musculus | Mutation(s): 0  | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
YVF (Subject of Investigation/LOI) Query on YVF | F [auth R] | methyl (2R)-2-({(1M)-5-methyl-1-[3-(trifluoromethyl)phenyl]-1H-pyrazole-3-carbonyl}amino)-2-(thiophen-2-yl)propanoate C20 H18 F3 N3 O3 S XCJKFSDARVULKK-IBGZPJMESA-N |
Funding Organization | Location | Grant Number |
---|---|---|
Defense Advanced Research Projects Agency (DARPA) | United States | HR0011-19-2-0020 |