Anticodon-like loop-mediated dimerization in the crystal structures of HdV-like CPEB3 ribozymes
Przytula-Mally, A.I., Engilberge, S., Johannsen, S., Olieric, V., Masquida, B., Sigel, R.K.(2022) bioRxiv 
Experimental Data Snapshot
Starting Model: experimental
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(2022) bioRxiv 
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
U1 small nuclear ribonucleoprotein A | 91 | Homo sapiens | Mutation(s): 0  Gene Names: SNRPA | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P09012 (Homo sapiens) Explore P09012  Go to UniProtKB:  P09012 | |||||
PHAROS:  P09012 GTEx:  ENSG00000077312  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P09012 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
chimpanzee CPEB3 ribozyme | 69 | Pan troglodytes | |||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | G [auth C] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
K Query on K | E [auth A], F [auth B], H [auth C] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 120.254 | α = 90 |
b = 135.916 | β = 90 |
c = 83.254 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
University of Zurich | Switzerland | FK-18-097 |
Agence Nationale de la Recherche (ANR) | Switzerland | ANR-10-IDEX-0002 |
Agence Nationale de la Recherche (ANR) | Switzerland | ANR-17-EUR-0023 |