pH-dependent alteration of substrate specificity of plant trehalase and its molecular mechanism
Taguchi, Y., Saburi, W., Yu, J., Imai, R., Yao, M., Mori, H.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Trehalase | 572 | Arabidopsis thaliana | Mutation(s): 0  Gene Names: TRE1, At4g24040, T19F6.15, T19F6.30 EC: 3.2.1.28 | ||
UniProt | |||||
Find proteins for Q9SU50 (Arabidopsis thaliana) Explore Q9SU50  Go to UniProtKB:  Q9SU50 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9SU50 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PO4 (Subject of Investigation/LOI) Query on PO4 | D [auth A], H [auth B] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
GOL (Subject of Investigation/LOI) Query on GOL | C [auth A], F [auth A], G [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
NA (Subject of Investigation/LOI) Query on NA | E [auth A], I [auth B] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 54.981 | α = 90 |
b = 129.813 | β = 90 |
c = 155.802 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XDS | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Japan Society for the Promotion of Science (JSPS) | Japan | 18J20503 |