Crystal structure of cytoplasmic Serine-tRNA ligase from Neisseria fowlerii in complex with AMP
Abendroth, J., Lorimer, D.D., Edwards, T.E.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Serine-tRNA ligase | 485 | Naegleria fowleri | Mutation(s): 0  Gene Names: Nfow_scaffold00184 | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
AMP Query on AMP | D [auth A], F [auth B], H [auth C] | ADENOSINE MONOPHOSPHATE C10 H14 N5 O7 P UDMBCSSLTHHNCD-KQYNXXCUSA-N | |||
EDO Query on EDO | E [auth A], G [auth B], I [auth C] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 168.19 | α = 90 |
b = 168.19 | β = 90 |
c = 111.5 | γ = 120 |
Software Name | Purpose |
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XDS | data reduction |
XSCALE | data scaling |
MoRDa | phasing |
Coot | model building |
PHENIX | refinement |
PDB_EXTRACT | data extraction |